Convert phyloseq object to tidytacos object

from_phyloseq() returns a tidytacos object given a phyloseq object.

Usage

from_phyloseq(ps)

Arguments

ps

Phyloseq object.

Value

A tidytacos object.

Details

This function will convert a phyloseq object into a tidytacos object. To convert from a tidytacos object to a phyloseq object use as_phyloseq().

See also

Other import-methods: create_tidytacos(), from_dada(), read_tidytacos()

Examples

phylo_obj <- readRDS(system.file("extdata","phyloseq.rds",package='tidytacos'))
taco <- from_phyloseq(phylo_obj)
#> Joining with `by = join_by(sample)`
#> Joining with `by = join_by(taxon)`