Human microbiome samples from the upper respiratory tract (URT),
taken from a paper by De Boeck et al. It contains nose as well as nasopharynx samples.
Most samples were taken using a swab method, but a minority was taking with the aspirate method.
Usage
urt
Format
urt
A tidytacos object with 1,947 taxa and 207 samples:
participant
individual participant ID
location
nose (N) or nasopharynx (NF)
method
swab (S) or aspirate (A)
plate
which of the three plates sequenced the sample is located on
