
Return an interactive venn diagram of overlapping taxon_ids between conditions
Source:R/plotters.R
tacoplot_venn_ly.RdReturn an interactive venn diagram of overlapping taxon_ids between conditions
Arguments
- ta
A tidytacos object.
- condition
The name of a variable in the samples table that contains a categorical value.
- ...
Arguments passed on to
ggVennDiagram::ggVennDiagramxlist of items
category.namesdefault is names(x)
show_intersectif TRUE the text can be visualized by `plotly`
set_colorcolor of set labels ("black")
set_sizesize of set labels (NA)
labelformat of region labels, select one from c("count","percent","both","none")
label_alphaset 0 to remove the background of region labels
label_geomlayer of region labels, choose from c("label", "text")
label_colorcolor of region labels ("black")
label_sizesize of region labels (NA)
label_percent_digitnumber of digits when formatting percent label (0)
label_txtWidthwidth of text used in showing intersect members, will be ignored unless show_intersection is TRUE (40)
edge_ltyline type of set edges ("solid")
edge_sizeline width of set edges (1)
force_upsetif TRUE, will always produce Upset plot no matter how many sets have (FALSE)
nintersectsnumber of intersects. If NULL, all intersections will show.
order.intersect.by'size', 'name', or "none"
order.set.by'size', 'name', or "none"
relative_heightthe relative height of top panel in upset plot
relative_widththe relative width of left panel in upset plot