Return an interactive venn diagram of overlapping taxon_ids between conditions
Source:R/plotters.R
tacoplot_venn_ly.Rd
Return an interactive venn diagram of overlapping taxon_ids between conditions
Arguments
- ta
A tidytacos object.
- condition
The name of a variable in the samples table that contains a categorical value.
- ...
Arguments passed on to
ggVennDiagram::ggVennDiagram
x
list of items
category.names
default is names(x)
show_intersect
if TRUE the text can be visualized by `plotly`
set_color
color of set labels ("black")
set_size
size of set labels (NA)
label
format of region labels, select one from c("count","percent","both","none")
label_alpha
set 0 to remove the background of region labels
label_geom
layer of region labels, choose from c("label", "text")
label_color
color of region labels ("black")
label_size
size of region labels (NA)
label_percent_digit
number of digits when formatting percent label (0)
label_txtWidth
width of text used in showing intersect members, will be ignored unless show_intersection is TRUE (40)
edge_lty
line type of set edges ("solid")
edge_size
line width of set edges (1)
force_upset
if TRUE, will always produce Upset plot no matter how many sets have (FALSE)
nintersects
number of intersects. If NULL, all intersections will show.
order.intersect.by
'size', 'name', or "none"
order.set.by
'size', 'name', or "none"
relative_height
the relative height of top panel in upset plot
relative_width
the relative width of left panel in upset plot