ldaplot_alignment()
plots the alignment of LDA topics across models.
Arguments
- lda_alignment
The output of
align_lda_topics()
.- show_product
Whether to show the product or transport alignment.
- ...
Arguments passed on to
alto::plot_alignment
x
(required) An alignment class object resulting from
align_topics
.rect_gap
(optional) A float describing how much vertical space to put between topics within the same model. The units correspond to topic masses. Defaults to 0.2.
color_by
(optional) What should the color of topics and weights encode? Defaults to 'path'. Other possible arguments are 'coherence', 'refinement', or 'topic'.
model_name_repair_fun
(optional) How should names be repaired before plotting?
label_topics
(optional, default =
FALSE
) Alogical
specifying if topics should be labeled with the"color_by"
information.add_leaves
(optional, default =
FALSE
) Alogical
specifying if the topic composition of leave-topics should be printed.leaves_text_size
(optional, default =
10
) specifies the font size of leaves annotations inpt
ifadd_leaves
isTRUE
.n_features_in_leaves
(optional, default = 3) specifies the maximum number of features that should be included in the leaves annotations if
add_leaves
isTRUE
.min_feature_prop
(optional, default = 0.1) specifies the minimum proportion of a feature in a topic for that feature to be included in the leaves annotations if
add_leaves
isTRUE
.top_n_edges
(optional,
integer
, default =NULL
) specifies the number of edges that should be drawn between the topics of subsequent models. Thetop_n_edges
with the highest weights are drawn. IfNULL
(default), all edges are drawn.