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This function returns a matrix with taxon counts; the rows are samples and the columns are taxa.

Usage

counts_matrix(
  ta,
  sample_name = sample_id,
  taxon_name = taxon_id,
  value = count
)

Arguments

ta

A tidytacos object.

sample_name

The name of the variable in the sample table to use as row names (unquoted).

taxon_name

The name of the variable in the taxon table to use as column names (unquoted).

value

The name of the variable in the counts table to use as count

Value

A matrix with count values.